Published
HK, Xiaohan Wang
Digital tools for analyzing nondiffeomorphic shapes , Proc. Natl. Acad. Sci. U.S.A. 122 (46) e2426574122,
https://doi.org/10.1073/pnas.2426574122 (2025)
K. Fetcko-Fayad, X. Zheng, D. Godfrey,
HK, S. Mukherjee, K. Lafata, J. Thomas, K. Peters, M. Ryser
NIMG-47. LONGITUDINAL TRAJECTORIES FROM SERIAL SURVEILLANCE MRI IMAGING OF PROGRESSIVE IDH MUTANT LOW-GRADE GLIOMA PATIENTS , Neuro-Oncology 25 (2023) pp. 196-196.
https://doi.org/10.1093/neuonc/noad179.0743
HK, S. Mukherjee
Representing fields without correspondences: the lifted euler characteristic transform , Journal of Applied and Computational Topology (2023): 1-34.
arxiv
W.S.Tang, G.M. da Silva,
HK, E.Skeens, B.Feng, T.Sudijono, K.K. Yang, S.Mukherjee, B.Rubenstein, L.Crawford
A topological data analytic approach for discovering biophysical signatures in protein dynamics, PLoS Comput Biol 18(5): e1010045.
https://doi.org/10.1371/journal.pcbi.1010045
B.Wang*, T.Sudijono*,
HK*, T.Gao, D.M.Boyer, S.Mukherjee, L.Crawford
SINATRA: A Sub-Image Analysis Pipeline for Selecting Features that Differentiate Classes of 3D Shapes, The Annals of Applied Statistics, 15 (2021), pp. 638–661.
biorxiv
R.Johnston, P.Vullioud, J.Thorley,
HK, L.Shen, S.Mukherjee, C.Karner, T.Clutton-Brock, J.Tung
Morphological and genomic shifts in mole-rat 'queens' increase fecundity but reduce skeletal integrity, eLife, 10 (2021).
E.Fulwood, S.Shan, J.Winchester,
HK, T.Gao, D.M.Boyer, I.Daubechies
Dietary adaptation in lemurs, analyzed using new approaches to describing functional properties of tooth shape, The FASEB Journal 34 (S1), 1-1, (2020).
E.Fulwood, S.Shan, J.Winchester,
HK, R.Ravier, S.Kovalsky, I.Daubechies, D.M.Boyer
Insights from macroevolutionary modelling and ancestral state reconstruction into the radiation and historical dietary ecology of Lemuriformes (Primates, Mammalia), BMC Ecol Evo 21, 60 (2021).
E.Fulwood, S.Shan, J.Winchester,
HK, T.Gao, D.M.Boyer, I.Daubechies
Reconstructing dietary ecology of extinct strepsirrhines (Primates, Mammalia) with new approaches for characterizing and analyzing tooth shape, Paleobiology, 47(4), (2021), pp. 612-631.
S.Rolfe, S.Pieper, A.Porto, K.Diamond, J.Winchester, S.Shan,
HK, D.M.Boyer, A.Summers, M.A.Maga
SlicerMorph: An open and extensible platform to retrieve, visualize and analyze 3D morphology, Methods in Ecology and Evolution, Vol 12, Issue 10 (2021), pp. 1816-1825.
